| Accession | HsInv0035 | Region of the inversion | chr17:57999876-58000526 |
| Status | Predicted | Prediction type | Simple |
| Estimated Inversion Size | 477 bp | Supporting predictions | 1 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Inverts a region within an intron of a gene | Breakpoint 1 | chr17:57999876-57999896 |
| Ancestral orientation | NA | Breakpoint 2 | chr17:58000197-58000526 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Sequencing and analysis of the independently assembled diploid J. Craig Venter genome (HuRef) | ||||||||||||||
| Method | Genome sequence comparison | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr17:57999778-57999778 | Breakpoint 2 | chr17:58000250-58000250 | ||||
| Individuals |
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+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr17:57999876-57999896 | Breakpoint 2 | chr17:58000197-58000526 | ||
| Description | Breakpoints defined by comparison with HuRef Human Genome assembly | ||||
| Definition method | Manual curation | ||||
| Mechanism of origin |
ND
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| Flexibility | 10.04 | GC content | 0.57 | Stability | 2.01 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
- TLK2
| Gene position | chr17:57910117-58046573 |
| Mechanism | Inverts a region within an intron of a gene |
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:15:24
| Breakpoint 1 | chr17:57999876-57999896 | Breakpoint 2 | chr17:58000197-58000526 |
| Assembly | hg18 | ||
| Description | Breakpoints defined by comparison with HuRef Human Genome assembly | ||
| Definition method | Manual curation | ||
- 2015-02-23 10:15:24
| Breakpoint 1 | chr17:57998778-58000778 | Breakpoint 2 | chr17:57999250-58001250 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
