| Accession | HsInv0325 | Region of the inversion | chr10:37421321-37443099 |
| Status | Predicted | Prediction type | Simple |
| Estimated Inversion Size | 15,403 bp | Supporting predictions | 2 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr10:37421321-37431321 |
| Ancestral orientation | NA | Breakpoint 2 | chr10:37440346-37443099 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Integrated analysis of structural variants in 2,504 human genomes through short-read and long-read DNA sequencing and statistical imputation using the 1000 Genomes Project data | ||||||||||
| Method | Paired-end mapping (PEM), Long-read sequencing | ||||||||||
| Name | |||
| Breakpoint 1 | chr10:37426321-37426321 | Breakpoint 2 | chr10:37438099-37438099 |
| Individuals | 1 out of 2504 individuals
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- Martinez-Fundichely et al. 2014 (in preparation)
| Description | Accurate prediction of inversions in the human genome from Kidd et al. 2008 fosmid paired-end mapping data using the GRIAL algorithm, and validation of some predictions by sequence analysis and PCR | ||||||||||||||||||||||||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||||||||||||||||||||||||
| Name | |||||||||||||||||||||||
| Breakpoint 1 | chr10:37407606-37432570 | Breakpoint 2 | chr10:37440346-37472595 | ||||||||||||||||||||
| D/C Score | -0.87 | Disc. Support Prob. | 0.98524 | ||||||||||||||||||||
| Support | 22 probes | ||||||||||||||||||||||
| Individuals |
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+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr10:37421321-37431321 | Breakpoint 2 | chr10:37440346-37443099 | ||
| Definition method | Default informatic definition | ||||
| Mechanism of origin |
ND
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| Flexibility | 10.85 | GC content | 0.33 | Stability | 1.82 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2017-09-18 00:00:00
| Breakpoint 1 | chr10:37421321-37431321 | Breakpoint 2 | chr10:37440346-37443099 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:14:26
| Breakpoint 1 | chr10:37407606-37432570 | Breakpoint 2 | chr10:37440346-37472595 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
