| Accession | HsInv0150 | Region of the inversion | chr13:47666378-47683755 |
| Status | Predicted | Prediction type | Simple |
| Estimated Inversion Size | 7,378 bp | Supporting predictions | 2 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr13:47666378-47676378 |
| Ancestral orientation | NA | Breakpoint 2 | chr13:47673755-47683755 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Integrated analysis of structural variants in 2,504 human genomes through short-read and long-read DNA sequencing and statistical imputation using the 1000 Genomes Project data | ||||||||||
| Method | Paired-end mapping (PEM), Long-read sequencing | ||||||||||
| Name | |||
| Breakpoint 1 | chr13:47671378-47671378 | Breakpoint 2 | chr13:47678755-47678755 |
| Individuals | 41 out of 2504 individuals
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| Description | Paired-end mapping of 3-kb fragments in an African and in a putatively European individual with some predictions validated by PCR, fiber-FISH or comparison with Celera assembly | ||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||
| Name | |||||||||
| Breakpoint 1 | chr13:47670169-47670169 | Breakpoint 2 | chr13:47677308-47677308 | ||||||
| Individuals |
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+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr13:47666378-47676378 | Breakpoint 2 | chr13:47673755-47683755 | ||
| Definition method | Default informatic definition | ||||
| Mechanism of origin |
ND
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| Flexibility | 10.73 | GC content | 0.38 | Stability | 1.78 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2017-09-18 00:00:00
| Breakpoint 1 | chr13:47666378-47676378 | Breakpoint 2 | chr13:47673755-47683755 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:14:59
| Breakpoint 1 | chr13:47663359-47676979 | Breakpoint 2 | chr13:47670498-47684118 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
