| Accession | HsInv0139 | Region of the inversion | chr19:20592324-20675770 |
| Status | Predicted | Prediction type | Simple |
| Estimated Inversion Size | 82,746 bp | Supporting predictions | 4 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr19:20592324-20593393 |
| Ancestral orientation | NA | Breakpoint 2 | chr19:20675438-20675770 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Paired-end mapping analysis of the J. Craig Venter genome (HuRef) | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr19:20592734-20594356 | Breakpoint 2 | chr19:20673512-20674837 | ||||
| Individuals |
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| Description | Next generation sequencing and analysis by paired-end mapping of an individual genome of African origin | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr19:20593743-20594288 | Breakpoint 2 | chr19:20675662-20675993 | ||||
| Individuals |
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| Description | Next generation sequencing and analysis by paired-end mapping of a Korean individual genome | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr19:20592793-20592924 | Breakpoint 2 | chr19:20675983-20676038 | ||||
| Individuals |
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| Description | Paired-end mapping of 3-kb fragments in an African and in a putatively European individual with some predictions validated by PCR, fiber-FISH or comparison with Celera assembly | ||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||
| Name | |||||||||
| Breakpoint 1 | chr19:20597114-20597114 | Breakpoint 2 | chr19:20674868-20674868 | ||||||
| Individuals |
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+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr19:20592324-20593393 | Breakpoint 2 | chr19:20675438-20675770 | ||
| Definition method | Default informatic definition | ||||
| Mechanism of origin |
ND
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| Flexibility | 11.29 | GC content | 0.27 | Stability | 1.76 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:15:00
| Breakpoint 1 | chr19:20592324-20593393 | Breakpoint 2 | chr19:20675438-20675770 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:00
| Breakpoint 1 | chr19:20592324-20593393 | Breakpoint 2 | chr19:20675438-20676583 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:00
| Breakpoint 1 | chr19:20592324-20593393 | Breakpoint 2 | chr19:20675438-20675770 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
