| Accession | HsInv0091 | Region of the inversion | chr6:12539263-12540984 |
| Status | Validated | Prediction type | Simple |
| Estimated Inversion Size | 660 bp | Supporting predictions | 3 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr6:12539263-12540321 |
| Ancestral orientation | NA | Breakpoint 2 | chr6:12539918-12540984 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Paired-end mapping analysis of the J. Craig Venter genome (HuRef) | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr6:12532787-12540013 | Breakpoint 2 | chr6:12540667-12549961 | ||||
| Individuals |
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| Description | Next generation sequencing and analysis by paired-end mapping of a Korean individual genome | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr6:12539721-12539863 | Breakpoint 2 | chr6:12540384-12540518 | ||||
| Individuals |
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| Description | Paired-end mapping of 3-kb fragments in an African and in a putatively European individual with some predictions validated by PCR, fiber-FISH or comparison with Celera assembly | ||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||
| Name | |||||||||
| Breakpoint 1 | chr6:12540543-12540543 | Breakpoint 2 | chr6:12543046-12543046 | ||||||
| Individuals |
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+ Validation and genotyping
| Description | Paired-end mapping of 3-kb fragments in an African and in a putatively European individual with some predictions validated by PCR, fiber-FISH or comparison with Celera assembly | ||
| Method | Polymerase chain reaction (PCR) |
| Status | Validated |
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr6:12539263-12540321 | Breakpoint 2 | chr6:12539918-12540984 | ||
| Definition method | Default informatic definition | ||||
| Mechanism of origin |
ND
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| Flexibility | 11.11 | GC content | 0.45 | Stability | 1.82 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:15:00
| Breakpoint 1 | chr6:12539263-12540321 | Breakpoint 2 | chr6:12539918-12540984 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:00
| Breakpoint 1 | chr6:12539263-12540321 | Breakpoint 2 | chr6:12539918-12540984 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:00
| Breakpoint 1 | chr6:12539263-12540321 | Breakpoint 2 | chr6:12539918-12540984 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
