| Accession | HsInv0193 | Region of the inversion | chr20:10730867-10742686 |
| Status | Validated | Prediction type | Simple |
| Estimated Inversion Size | 1,037 bp | Supporting predictions | 1 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr20:10730867-10741568 |
| Ancestral orientation | NA | Breakpoint 2 | chr20:10731822-10742686 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Next generation sequencing and analysis by paired-end mapping of an individual genome of African origin | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr20:10736007-10736428 | Breakpoint 2 | chr20:10737125-10737383 | ||||
| Individuals |
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+ Validation and genotyping
| Description | Data mining approach to merge SV calls of different algorithms from next generation sequencing data from 27 deep-coverage human genomes from the 1000 Genomes Project | ||
| Method | Polymerase chain reaction (PCR) |
| Status | Validated |
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr20:10730867-10741568 | Breakpoint 2 | chr20:10731822-10742686 | ||
| Definition method | Default informatic definition | ||||
| Mechanism of origin |
ND
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| Flexibility | 10.58 | GC content | 0.52 | Stability | 2 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:15:01
| Breakpoint 1 | chr20:10730867-10741568 | Breakpoint 2 | chr20:10731822-10742686 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
