| Accession | HsInv0194 | Region of the inversion | chr1:173461849-173474125 |
| Status | Predicted | Prediction type | Simple |
| Estimated Inversion Size | 1,508 bp | Supporting predictions | 2 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr1:173461849-173472396 |
| Ancestral orientation | NA | Breakpoint 2 | chr1:173463135-173474125 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Next generation sequencing and analysis by paired-end mapping of an individual genome of African origin | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr1:173466835-173467410 | Breakpoint 2 | chr1:173468564-173468696 | ||||
| Individuals |
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| Description | Next generation sequencing and analysis by paired-end mapping of a Korean individual genome | ||||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr1:173466974-173467418 | Breakpoint 2 | chr1:173468400-173468519 | ||||
| Individuals |
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| Comments | Prediction within region overlapping more than 90% of their length with simple repeats, low complexity repeats, or satellite repeats | ||||||
+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr1:173461849-173472396 | Breakpoint 2 | chr1:173463135-173474125 | ||
| Description | Breakpoints calculated without considering unreliable predictions | ||||
| Definition method | Default informatic definition | ||||
| Mechanism of origin |
ND
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| Flexibility | 13.91 | GC content | 0.32 | Stability | 1.62 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:15:02
| Breakpoint 1 | chr1:173466818-173467574 | Breakpoint 2 | chr1:173467919-173469000 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:02
| Breakpoint 1 | chr1:173461849-173472396 | Breakpoint 2 | chr1:173463135-173474125 |
| Assembly | hg18 | ||
| Description | Breakpoints calculated without considering unreliable predictions | ||
| Definition method | Default informatic definition | ||
