| Accession | HsInv0202 | Region of the inversion | chr6:26843077-26874671 |
| Status | Predicted | Prediction type | Simple |
| Estimated Inversion Size | 21,712 bp | Supporting predictions | 3 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr6:26843077-26853077 |
| Ancestral orientation | NA | Breakpoint 2 | chr6:26864904-26874671 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Integrated analysis of structural variants in 2,504 human genomes through short-read and long-read DNA sequencing and statistical imputation using the 1000 Genomes Project data | ||||||||||
| Method | Paired-end mapping (PEM), Long-read sequencing | ||||||||||
| Name | |||
| Breakpoint 1 | chr6:26848077-26848077 | Breakpoint 2 | chr6:26869671-26869671 |
| Individuals | 11 out of 2504 individuals
 | ||
| Description | Next generation sequencing and analysis by paired-end mapping of an individual genome of African origin | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr6:26847595-26848312 | Breakpoint 2 | chr6:26870318-26870465 | ||||
| Individuals |
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| Description | Next generation sequencing and analysis by paired-end mapping of a Korean individual genome | ||||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr6:26848023-26848181 | Breakpoint 2 | chr6:26869278-26869670 | ||||
| Individuals |
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| Comments | Prediction within region overlapping more than 90% of their length with simple repeats, low complexity repeats, or satellite repeats | ||||||
+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr6:26843077-26853077 | Breakpoint 2 | chr6:26864904-26874671 | |||||||||||||||||||
| Definition method | Default informatic definition | |||||||||||||||||||||
| Mechanism of origin |
ND
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| Flexibility | 11.59 | GC content | 0.49 | Stability | 1.87 |
| Position SD1 | Size (bp) | Position SD2 | Size (bp) | Identity | Relative orientation |
| chr6:26810366-26849665 | 39,300 | chr6:26868027-26906320 | 38,294 | 0.981 | Inverted |
| chr6:26849681-26868293 | 18,613 | chr6:26872741-26891196 | 18,456 | 0.959 | Inverted |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2017-09-18 00:00:00
| Breakpoint 1 | chr6:26843077-26853077 | Breakpoint 2 | chr6:26864904-26874671 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:03
| Breakpoint 1 | chr6:26847581-26848623 | Breakpoint 2 | chr6:26869070-26869878 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:03
| Breakpoint 1 | chr6:26842751-26853156 | Breakpoint 2 | chr6:26864904-26875879 |
| Assembly | hg18 | ||
| Description | Breakpoints calculated without considering unreliable predictions | ||
| Definition method | Default informatic definition | ||
