| Accession | HsInv0626 | Region of the inversion | chr7:158618111-158649824 |
| Status | Validated | Prediction type | Simple |
| Estimated Inversion Size | 30,706 bp | Supporting predictions | 2 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Breaks one gene | Breakpoint 1 | chr7:158618111-158619076 |
| Ancestral orientation | NA | Breakpoint 2 | chr7:158648773-158649824 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Next generation sequencing and analysis by paired-end mapping of a Korean individual genome | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr7:158618476-158618711 | Breakpoint 2 | chr7:158649224-158649373 | ||||
| Individuals |
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| Description | Paired-end mapping of 3-kb fragments in an African and in a putatively European individual with some predictions validated by PCR, fiber-FISH or comparison with Celera assembly | ||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||
| Name | |||||||||
| Breakpoint 1 | chr7:158618645-158618645 | Breakpoint 2 | chr7:158644459-158644459 | ||||||
| Individuals |
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+ Validation and genotyping
| Description | Paired-end mapping of 3-kb fragments in an African and in a putatively European individual with some predictions validated by PCR, fiber-FISH or comparison with Celera assembly | ||
| Method | Polymerase chain reaction (PCR) |
| Status | Validated |
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr7:158618111-158619076 | Breakpoint 2 | chr7:158648773-158649824 | ||
| Definition method | Default informatic definition | ||||
| Mechanism of origin |
ND
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| Flexibility | 10.79 | GC content | 0.36 | Stability | 1.84 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
- VIPR2
| Gene position | chr7:158513626-158630410 |
| Mechanism | Breaks one gene |
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:15:10
| Breakpoint 1 | chr7:158618111-158619076 | Breakpoint 2 | chr7:158648773-158649824 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
