| Accession | HsInv0838 | Region of the inversion | chr16:44965814-45000535 |
| Status | Unreliable prediction | Prediction type | Simple |
| Estimated Inversion Size | 23,003 bp | Supporting predictions | 3 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr16:44965814-44976823 |
| Ancestral orientation | NA | Breakpoint 2 | chr16:44988107-45000535 |
|
|
 |
|
|
Human Polymorphic Inversion DataBase
|
General information
- Region map
+ Predictions
| Description | Next generation sequencing and analysis by paired-end mapping of an individual genome of African origin | ||||||||||||||||||||||||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||||||||||||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr16:44971262-44971375 | Breakpoint 2 | chr16:44993599-44993668 | ||||
| Individuals |
| ||||||
| Comments | Prediction within region overlapping more than 90% of their length with simple repeats, low complexity repeats, or satellite repeats | ||||||
| Name | |||||||
| Breakpoint 1 | chr16:44971262-44971375 | Breakpoint 2 | chr16:44994974-44995071 | ||||
| Individuals |
| ||||||
| Comments | Prediction within region overlapping more than 90% of their length with simple repeats, low complexity repeats, or satellite repeats | ||||||
| Description | Next generation sequencing and analysis by paired-end mapping of a Korean individual genome | ||||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr16:44966348-44966632 | Breakpoint 2 | chr16:44990190-44990295 | ||||
| Individuals |
| ||||||
| Comments | Prediction within region overlapping more than 90% of their length with simple repeats, low complexity repeats, or satellite repeats | ||||||
+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr16:44965814-44976823 | Breakpoint 2 | chr16:44988107-45000535 | ||
| Description | Breakpoints not refined due to lack of overlap of predictions in at least one breakpoint. Breakpoints calculated without considering unreliable predictions | ||||
| Definition method | Default informatic definition | ||||
| Mechanism of origin |
ND
|
||||
| Flexibility | 12.14 | GC content | 0.34 | Stability | 1.89 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:15:19
| Breakpoint 1 | chr16:44966032-44966948 | Breakpoint 2 | chr16:44989695-44990790 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:19
| Breakpoint 1 | chr16:44965814-44976823 | Breakpoint 2 | chr16:44988107-45000535 |
| Assembly | hg18 | ||
| Description | Breakpoints not refined due to lack of overlap of predictions in at least one breakpoint. Breakpoints calculated without considering unreliable predictions | ||
| Definition method | Default informatic definition | ||
