| Accession | HsInv0185 | Region of the inversion | chr16:54348245-54428090 |
| Status | Predicted | Prediction type | Simple |
| Estimated Inversion Size | 78,924 bp | Supporting predictions | 2 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr16:54348245-54349342 |
| Ancestral orientation | NA | Breakpoint 2 | chr16:54427344-54428090 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Paired-end mapping analysis of the J. Craig Venter genome (HuRef) | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr16:54350056-54354976 | Breakpoint 2 | chr16:54423120-54429203 | ||||
| Individuals |
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| Description | Next generation sequencing and analysis by paired-end mapping of a Korean individual genome | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr16:54348742-54348845 | Breakpoint 2 | chr16:54427490-54427944 | ||||
| Individuals |
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+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr16:54348245-54349342 | Breakpoint 2 | chr16:54427344-54428090 | |||||||||||||
| Definition method | Default informatic definition | |||||||||||||||
| Mechanism of origin |
ND
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| Flexibility | 10.6 | GC content | 0.56 | Stability | 1.95 |
| Position SD1 | Size (bp) | Position SD2 | Size (bp) | Identity | Relative orientation |
| chr16:54345539-54379462 | 33,924 | chr16:54400016-54430930 | 30,915 | 0.945 | Inverted |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:15:19
| Breakpoint 1 | chr16:54348245-54349342 | Breakpoint 2 | chr16:54427344-54428090 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:19
| Breakpoint 1 | chr16:54348245-54349342 | Breakpoint 2 | chr16:54427344-54428090 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
