| Accession | HsInv1050 | Region of the inversion | chr7:70031528-70106476 |
| Status | Obsolete | Prediction type | Simple |
| Estimated Inversion Size | 42,289 bp | Supporting predictions | 3 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr7:70031528-70066512 |
| Ancestral orientation | NA | Breakpoint 2 | chr7:70076139-70106476 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Identification of human inversion polymorphisms by comparative analysis of human and chimpanzee genome sequence assemblies | ||||||||||
| Method | Genome sequence comparison | ||||||||||
| Name | |||
| Breakpoint 1 | chr7:70058905-70058906 | Breakpoint 2 | chr7:70076823-70076824 |
| Individuals | |||
- Martinez-Fundichely et al. 2014 (in preparation)
| Description | Accurate prediction of inversions in the human genome from Kidd et al. 2008 fosmid paired-end mapping data using the GRIAL algorithm, and validation of some predictions by sequence analysis and PCR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Name | |||||||||||||||||||||||
| Breakpoint 1 | chr7:70032007-70064629 | Breakpoint 2 | chr7:70076139-70106476 | ||||||||||||||||||||
| D/C Score | 0.75 | Disc. Support Prob. | 0.02333 | ||||||||||||||||||||
| Individuals |
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| Name | |||||||||||||||||||||||
| Breakpoint 1 | chr7:70031528-70066512 | Breakpoint 2 | chr7:70076380-70104763 | ||||||||||||||||||||
| D/C Score | 0.26 | Disc. Support Prob. | 0.71097 | ||||||||||||||||||||
| Individuals |
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+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr7:70031528-70066512 | Breakpoint 2 | chr7:70076139-70106476 | ||
| Description | Breakpoints not refined due to lack of overlap of predictions in at least one breakpoint | ||||
| Definition method | Default informatic definition | ||||
| Mechanism of origin |
ND
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| Flexibility | 11.18 | GC content | 0.42 | Stability | 1.79 |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
